Person ← Department of Cybernetics


Member of:
Lidi s celokatederní působností
Current Position:
External teacher
Current Projects:
2009-2012: Social network of IT professionals (SoSIReCR - Socialni sit informatiku v regionech CR), project from the Education for Competitiveness Operational Programme supported by the European Social Fund, investigator (CTU in Prague)

2006-2010: CzechVMXT: Czech IT Project Process Improvement for Dependable-Systems Research, EU 6FP - Marie Curie Transfer of Knowledge Project, team member

Bio Inspired Algorithms, Evolutionary Optimization Algorithms


Ph.D. in Artificial Intelligence and Biocybernetics at Czech Technical University (2001), thesis on "On Improving of the Efficiency of Genetic Algorithms" (supervision: Dr. Jiri Lazansky).

MSc. (Ing.) in Computer Science at Czech Technical University (1994), diploma thesis on "Scheduling by Means of Genetic Algorithms" (supervision: Dr. Jiri Lazansky)

Journal papers

Posik, P. and Kubalik, J.: Experimental Comparison of Six Population-Based Algorithms for Continuous Black Box Optimization. Evolutionary Computation 20(4), pp. 483-508, doi:10.1162/EVCO_a_00083, 2012. (online)

Kremmel, T., Kubalik, J., Biffl, S.: Software Project Portfolio Optimization with Advanced Multiobjective Evolutionary Algorithms. Applied Soft Computing. 2011, vol. 11, no. 1, p. 1416-1426. ISSN 1568-4946. SoftwareProjectPortfolioOptimization (pdf, online)

Kubalik, J., Tichy, P., Sindelar, R., Staron, R.J.: Clustering Methods for Agent Distribution Optimization. IEEE Transactions on Systems, Man, and Cybernetics: Part C. 2010, vol. 40, no. 1, p. 78-86. ISSN 1094-6977. (pdf, online)

Buryan, P. and Kubalik, J.: Context-Sensitive Refinements for Stochastic Optimisation Algorithms in Inductive Logic Programming . Artificial Intelligence Review. 2011, vol. 35, no. 1, p. 19-36. ISSN 0269-2821. (online)

Conference papers

Cerny, J. and Kubalik, J.: Analysis of Co-evolutionary Approach for Robotic Gait Generation. In Proceedings of the 5th International Joint Conference on Computational Intelligence. Porto: SciTePress - Science and Technology Publications, 2013, p. 37-46. ISBN 978-989-8565-77-8. (pdf)

Cerny, J. and Kubalik, J.: Co-evolutionary Approach to Design of Robotic Gait. In Applications of Evolutionary Computation. Heidelberg: Springer, 2013, p. 550-559. ISSN 0302-9743.ISBN 978-3-642-37191-2. (pdf, online)

Mlejnek, J. and Kubalik, J.: Evolutionary hyperheuristic for capacitated vehicle routing problem. In GECCO (Companion) 2013: pp. 219-220, (pdf, full version, online)

Kubalik, J.: Hyper-Heuristic Based on Iterated Local Search Driven by Evolutionary Algorithm. In EvoCOP 2012, ISBN: 978-3-642-29123-4, pp. 148-159, 2012. (pdf, online)

Kubalik, J.: Efficient stochastic local search algorithm for solving the shortest common supersequence problem. In Genetic and evolutionary computation. New York: ACM, 2010, p. 249-256. ISBN 978-1-4503-0073-5. (pdf, online)

Kubalik, J.: Evolutionary-Based Iterative Local Search Algorithm for the Shortest Common Supersequence Problem. In Proceedings of the 13th Annual Conference on Genetic and Evolutionary Computation [CD-ROM]. New York: ACM, 2011, p. 315-322. ISBN 978-1-4503-0557-0. (pdf, online)

Kubalik, J. - Buryan, P. - Wagner, L.: Solving the DNA Fragment Assembly Problem Efficiently Using Iterative Optimization with Evolved Hypermutations. In Genetic and Evolutionary Computation Conference. New York: ACM, 2010, p. 213-214. ISBN 978-1-4503-0073-5. (pdf, online)

Koutnik, J. - Kubalik, J.: Structure Aware Two Point Crossover for Grammatical Evolution. In MENDEL 2009 - 15th International Conference on Soft Computing. Brno: Brno University of Technology, 2009, p. 49-54. ISBN 978-80-214-3884-2.

Kubalik, J.: Solving the Sorting Network Problem Using Iterative Optimization with Evolved Hypermutations. In Genetic and Evolutionary Computation Conference 2009. New York: ACM, 2009, p. 301-308. ISBN 978-1-60558-325-9. (pdf, online)

Kubalik, J. - Mordinyi, R. - Biffl, S.: Multiobjective Prototype Optimization with Evolved Improvement Steps. In Evolutionary Computation in Combinatorial Optimization. Heidelberg: Springer, 2008, p. 218-229. ISBN 978-3-540-78603-0. (pdf, online)

Kubalik, J., Faigl, J.: Iterative Prototype Optimisation with Evolved Improvement Steps. 9th European Conferenceo Genetic Programming EuroGP 2006. Heidelberg: Springer, 2006, s. 154-165. ISBN 3-540-33143-3

Kubalik, J., Posik, P., Herold, J.: A Selecto-recombinative Genetic Algorithm with Continuous Chromosome Reconfiguration. Parallel Problem Solving from Nature - PPSN-IX. Heidelberg: Springer, 2006, s. 959-968. ISBN 3-540-38990-3

Kubalik, J., Rothkrantz, L.J.M., Lazansky, J.: Genetic Algorithm with Limited Convergence. In Grana, M., Duro, R., d'Anjou, A., and Wang, P.P., (Eds.), Information Processing with Evolutionary Algorithms: From Industrial Applications to Academic Speculations. Springer-Verlag, ISBN: 1-85233-866-0, pp. 216-235. 2005.

Klema, J., Kubalik, J., Lhotska, L.: Optimized Model Tuning in Medical Systems. Computer Methods and Programs in Biomedicine. 2005, vol. 80, no. 3, s. 17-28. ISSN 0169-2607

Kubalik, J.: Using Genetic Algorithms with Real-coded Binary Representation for Solving Non-stationary Problems. In Adaptive and Natural Computing Algoritms - Proceedings of the International Conference in Coimbra. Wien: Springer, 2005, s. 458-461. ISBN 3-211-24934-6

Kubalik, J.: Binary or Real? Real-coded Binary!. In proceedings of the 5th International Conference on Recent Advances in Soft Computing 2004, Nottingham, United Kingdom, 16 -18 December 2004.

Responsible person: Kristina Lukešová